Cytoscpae Past News

Cytoscape 2.3.2

(Updated 9/1/2006)
This release fixes a bug that made it impossible to save session files on Windows systems. No new features.

Cytoscape 2.3.1

(Updated 7/21/2006)
No major new features, just bug fixes and some behind-the-scenses refactoring.

Cytoscape 2.3

(Updated 06/21/2006)
New Features include:
  • High-performance rendering engine. Support for large networks (100,000+ nodes & edges)
  • Ability to save a session
  • Support for network attributes
  • An improved command line interface.
  • The GraphMerge plugin included by default
  • Enhanced context or pop-up menus for nodes
  • A rewritten bird's eye view of the network that is enabled by default
  • Enhanced Undo/Redo support
  • Enhanced Ontology Server Wizard
  • More user-friendly UI for Attribute Browser
  • Greater flexibility in expression data loading
  • Ability to rename networks
  • Re-organized menu system
  • Many performance improvements and bug fixes
Cytoscape 2.3.2 Release Notes Cytoscape 2.3.2 Screenshot

Announcing Cytoscape 2.2

(Updated 12/13/2005)
New Features include:
  • Improved node/edge attribute browsing.
  • Cytoscape Graph Editor v1.0
  • Support for Gene Ontology OBO and gene annotation (association) files
  • Cytoscape panels (CytoPanels) to ease window management
  • New GML visual style to manage visual attributes from GML files
  • Independent internal network windows for easy comparison
  • Simplified mechanism for saving Visual Styles in between sessions
  • Improved Attribute API (CyAttributes)
  • Improved performance
  • Many bugs fixed
Cytoscape 2.2 Release Notes Cytoscape 2.2 Screenshot